Simple Segmentation ( IASimpleSegmentation )

Segments binarized images using the pre set segmentation classifiers. Detects contiguous objects of pixel value "1" in frame by frame.
Each segment is marked by values corresponding to the label of the segment.
Use "Plot Morphological Parameters of Segments" function to create plots of mean segment data. Individual segment data are available for textual or Mathematica output.
Data/text window output: x,y : position of the center of the segment
z : time point or z position of the center of the segment
zspan : length of the segment in the third dimension (z or t)
V: volume
A: surface(maximum if present in multiple planes)
P: perimeter(maximum if present in multiple planes)
d: diameter(maximum if present in multiple planes)
S: surface
ShF: shape factor or circularity (mean if present in multiple planes) = 4*Pi*A/P^2
ShF3D: spherical shape factor = 36*Pi*V^2/S^3
Brnch: number branch points (for skeletonized objects)
The number of segments is limited only by the available memory.
Mathematica usage:
Result={number,{x,y,z},zspan, volume, maximal area, maximal perimeter, maximal diameter, surface, shape factor, spherical shape factor, number of branch points}