The relationship between Fourier domain and space domain
			
   Gray scale images are 
considered as being composed by superposition of two-dimensional 
(2D) sine waves. The spatial frequency or
Fourier domain 
representation of an image gives the amplitude (intensity) and phase 
(where does the sine wave start) of individual sine wave components 
as a function of direction and spatial frequency (w).
The discrete Fourier 
transformation converts spatial domain data into frequency 
domain data (e.g. B-G ii to i or H to I below), while
the inverse 
discrete Fourier 
transformation (the real part of the transform) converts 
frequency domain data back to spatial domain.
The Fourier domain comprises of complex numbers, and during 
visualization the absolute value of these complex values is shown. 
The ‘1’ here therefore means amplitude of 1 and phase of zero (the 
phase is the argument of the complex number). For better 
visualization the origin is placed (both for space and Fourier 
domain images) into the center of the images below.
(A) The origin of the Fourier domain 
corresponds to the mean intensity of the image.
(B-D) Single pixels of the Fourier domain 
correspond to different spatial sine waves; the frequency of the 
sine wave (i.e. how many times does the sine repeats across the 
image) equals to the absolute coordinate of the ‘1’ pixel in the 
Fourier domain.
(F) The angle of the sine waves correspond to the 
position (angle) of the ‘1’ pixel compared to the origin of the 
Fourier domain.
(G) When placing the origin in the middle, the 128 
pixels are scaled between -64 and 63, so the maximal spatial 
frequency is reached only at -64, resulting a line by line black and 
white striped spatial image 
| 
 | 
| 
The relationship between 
Fourier domain and space domain.
(A-G) 
Fourier domain images were generated as 128´128 
pixel blank (0) images with Mathematica 5.2, and the 
indicated pixel was set to 1.  (A) The origin of the
Fourier domain corresponds to the mean intensity of 
the image. (i) The middle 11´11 
pixel region of the 128´128 
Fourier domain (ii) is shown. (ii) Space domain, the uniform 
gray value represents 1/128 intensity corresponding to the 
single pixel set to 1 in (i & ii). (B-F) The middle 11´11 
pixel region of the Fourier domain (i) and the space domain 
(ii) are shown.   (G) The 128128 
Fourier domain (i) and the space domain (ii) are shown.  
(B-G ii) the amplitude (the maximal intensity corresponding 
to white) in the spatial images is 1/128.
(H) Maximum intensity projected 
wide-field fluorescence micrograph of a mito-DsRed2 
expressing neuron, a 512´512 
image, scaled at 0.27
mm/pixel. Scale bar, 10
mm  (I) The Fourier domain of image (H), shown 
in a logarithmic scale for better visibility. | 
Fourier domain image 
representations were generated by Mathematica (Wolfram Research).
